Toolboxes & Code Repositories

Access software tools, code repositories and technical resources developed by FAIR researchers. These outputs help researchers and practitioners build on existing work and accelerate innovation.

Title

Description

Filter(s)

3D-muscle-segmentation

A python repository for Automated MRI quantification of volumetric per muscle fat-fractions in the proximal leg of patients with muscular dystrophies

Health, Computer Vision, 2019-2023

ABOT toolbox V2

The toolbox enables cost-efficient optimization of manufacturing process design parameters. It achieves this through data-efficient methodologies for sequential experiment design, streamlining and enhancing optimization processes..

Industry, Optimization & Experimental Design, 2024-2028

ABOT-FU

Adhesive Bonding Optimization Toolbox with Uncertainty and Feasibility constraints

Industry, Optimization & Experimental Design, 2019-2023

APS Explorer

A web application for exploring and selecting datasets based on informed criteria, designed to support recommender system experiments.

Society, Predictive Modelling & Forecasting, 2024-2028

Babel

The all-in-one toolkit for multi-agent experiments on emergent communication

Society, Speech & Language AI, Robotics & Autonomous Systems, 2019-2023

BDPI

Bootstrapped Dual Policy Iteration: sample-efficient model-free RL with discrete actions

Industry, Reinforcement Learning & Sequential Decision Making, 2019-2023

BellatrExplorer

Interactive random forest local explainability toolbox

Health, Explainable & Trustworthy AI, 2024-2028

BELLATREX

Local explainability tool for Random (Survival) Forest predictions

Health, Explainable & Trustworthy AI, 2019-2023

Biased-rulers

A Python package for fairness metrics in language models

Society, Speech & Language AI, Explainable & Trustworthy AI, 2019-2023

BioSegment

Active learning based workflow for automated 3D-EM segmentation

Health, Computer Vision, 2019-2023

Calibration and Bias

A software for evaluating model calibration, volume bias and a correlation between the two

Health, 2019-2023, Explainable & Trustworthy AI, Computer Vision

Canonical_sets

Exposing Algorithmic Bias with Canonical Sets

2019-2023, Society, Explainable & Trustworthy AI

Canon OCT data processing

Loading and scrubbing of data XML files exported from Canon OCT-A1 machine.

2024-2028, Health, Computer Vision

Causalteshap

Library for treatment effect analysis

2024-2028, Health, Explainable & Trustworthy AI, Predictive Modelling & Forecasting

Cash or Comfort?

Code and analysis framework for studying how LLMs trade off financial rewards against user inconvenience.

Society, 2024-2028, Speech & Language AI, Explainable & Trustworthy AI

cDMN-solver

Solver for executing constraint Decision Model and Notation (cDMN) models.

2019-2023, Industry, Knowledge Representation & Reasoning, Predictive Modelling & Forecasting

cEASEr & Add-EASEr

‘cEASEr’ and ‘Add-EASEr’ algorithms, as presented in the publication ‘Closed-Form Models for Collaborative Filtering with Side-Information’

2019-2023, Society, Predictive Modelling & Forecasting

CI-EIG

A procedure for calculating confidence intervals for the eigendecomposition of covariance matrices.

2019-2023, Health, Predictive Modelling & Forecasting, Explainable & Trustworthy AI

ClusTCR

Library for unsupervised clustering of  large data sets of T cell receptor sequences.

2019-2023, Health, Predictive Modelling & Forecasting

COBRAS

Library for semi-supervised clustering using pairwise constraints

2019-2023, Industry, Predictive Modelling & Forecasting

Contextual Performance Profiling and Anomaly Detection

(PyPI-installable) Python package for time series anomaly detection.

2024-2028, Industry, Anomaly Detection & Monitoring, Predictive Modelling & Forecasting

CPMpy

a Constraint Programming and Modeling library in Python, based on numpy, with direct solver access.

Industry, Optimization & Experimental Design, 2019-2023, Knowledge Representation & Reasoning

Crepes-weighted

crepes-weighted extends crepes by adding support for weighted conformal prediction and predictive systems

2024-2028, Industry, Explainable & Trustworthy AI, Predictive Modelling & Forecasting

DASF

A library implementing the DASF algorithmic framework for solving linear signal or feature fusion optimization problems in a distributed setting, where different signal- or feature dimensions of each sample are spread across the nodes of a network.

 

2019-2023, Industry, Optimization & Experimental Design, Predictive Modelling & Forecasting

DeepMTP

A Python-based deep learning framework for multi-target prediction

2024-2028, Health, Predictive Modelling & Forecasting

DeepProbLog

Deep Learning and Probabilistic Logic Programming

2019-2023, Society, Knowledge Representation & Reasoning, Predictive Modelling & Forecasting

DeepStochLog

DeepStochLog is a neuro-symbolic framework that combines grammars, logic, probabilities and neural networks. 

2019-2023, Society, Knowledge Representation & Reasoning, Predictive Modelling & Forecasting

DeepVoxNet2

A Python library to  implement deep learning pipelines for medical applications using convolutional neural networks (CNNs).

2019-2023, Health, Computer Vision, Predictive Modelling & Forecasting

DMN-IDP

Interface for user-friendly and interactive execution of DMN

2019-2023, Industry, Knowledge Representation & Reasoning

DMN-IDPy

API for user-friendly and flexible execution of DMN.

2019-2023, Industry, Knowledge Representation & Reasoning

DTAIDistance

Time series distances (DTW, ED), clustering and subsequence search

2019-2023, Anomaly Detection & Monitoring, Predictive Modelling & Forecasting, Industry

Dual Bandit algorithm

‘Dual Bandit’ algorithm, as presented in the publication ‘Joint Policy-Value Learning for Recommendation’

2019-2023, Society, Reinforcement Learning & Sequential Decision Making, Predictive Modelling & Forecasting

DUST

DUST, the Distributed Uniform STreaming library for distributed artificial intelligence

2019-2023, Industry, Robotics & Autonomous Systems

dyngen

A simulation engine for dynamic models of single-cell transcriptomics data.

2019-2023, Health, Predictive Modelling & Forecasting

EGT-tools

A Python/C++ library which provides a centralized repository with analytical and numerical methods to study/model game theoretical problems under the Evolutionary Game Theory (EGT) framework.

2024-2028, Society, Reinforcement Learning & Sequential Decision Making, Predictive Modelling & Forecasting

EvalNE

Library for evaluation of graph representation learning methods.

2019-2023, Society, Predictive Modelling & Forecasting

EventNet

Algorithm for the detection of “events of interest” in time series

2019-2023, Industry, Anomaly Detection & Monitoring, Predictive Modelling & Forecasting

FlowSOM

A self-organizing map based approach for the automated analysis of cytometry data.

2019-2023, Health, Predictive Modelling & Forecasting

GENDIS

Library for shapelet extraction from time series using a genetic algorithm.

Industry, 2019-2023, Predictive Modelling & Forecasting

GPFlowOpt

Library for Bayesian optimization and active learning (only for Tensorflow 1.x)

2019-2023, Industry, Optimization & Experimental Design

GP-TPE

Multi-objective hyperparameter optimization with performance uncertainty

2019-2023, Industry, Optimization & Experimental Design

gym-covid

A gym environment for a compartment model modelling the first COVID wave in Belgium.

2024-2028, Health, Reinforcement Learning & Sequential Decision Making, Predictive Modelling & Forecasting

HSIToolbox

A software suite and a web application for labelling and managing HSI datasets, and training different deep learning models on these datasets.

2019-2023, Health, Computer Vision

IDP-Z3

A multi-inference engine for the FO(.) knowledge representation language

2019-2023, Industry, Knowledge Representation & Reasoning, Optimization & Experimental Design

INK

Library for the generation of human-comprehensible binary feature representations from nodes within a knowledge graphs

2024-2028, Industry, Knowledge Representation & Reasoning, Explainable & Trustworthy AI

Interactive Consultant

A decision support tool using knowledge expressed in the FO(.) language.

2019-2023, Industry, Knowledge Representation & Reasoning

Interactive eXplainable Artificial Intelligence (IXAI)

This toolbox enforces your Pytorch model to have correct local post-hoc explanations

2024-2028, Health, Explainable & Trustworthy AI

Landmarker

Library for (anatomical) landmark detection in images

2024-2028, Health, Computer Vision

LaserMon Toolbox

Sensor fusion technique for laser-based 3D print monitoring, including scripts for spatiotemporal data synchronization;

2024-2028, Industry, Anomaly Detection & Monitoring, Predictive Modelling & Forecasting

ledc-dino

Library for discovery of inconsistencies and outliers

2019-2023, Industry, Anomaly Detection & Monitoring

LIDAV

Code for learning local image descriptors with autoencoedrs and variational autoencoders

2019-2023, Society, Computer Vision

LSTCN

Long Short-term Cognitive Network (LSTCN) model for time series forecasting

Planet & Energy, 2019-2023, Predictive Modelling & Forecasting

MACAU

Scalable Bayesian factorization with high-dimensional side information using MCMC

2019-2023, Health, Predictive Modelling & Forecasting

MacaulayLab

Toolbox for solving systems of multivariate polynomial equations and rectangular multiparameter eigenvalue problems

2019-2023, Industry, Optimization & Experimental Design

MO-Gym

Library for multi-objective reinforcement learning environments

Society, 2019-2023, Reinforcement Learning & Sequential Decision Making

MOMAland

Open source Python library for developing and comparing multi-objective multi-agent reinforcement learning algorithms by providing a standard API to communicate between learning algorithms and environments, as well as a standard set of environments compliant with that API.

2024-2028, Planet & Energy, Reinforcement Learning & Sequential Decision Making, Robotics & Autonomous Systems

MoveRL

Gym Reinforcement Learning environment for ROS robots, with MoveIT planner and safety layer

2019-2023, Industry, Robotics & Autonomous Systems, Reinforcement Learning & Sequential Decision Making

Multi-agent systems toolbox

Toolbox containing several MAS environments, allowing to compare different algorithms

2019-2023, Industry, Robotics & Autonomous Systems, Reinforcement Learning & Sequential Decision Making

ORL-TAMP

Task and motion planning workflow with optimistic reinforcement learning-based skill insertions

2024-2028, Industry, Robotics & Autonomous Systems, Reinforcement Learning & Sequential Decision Making

pDMN-solver

Solver for executing probabilistic Decision Model and Notation (pDMN) models.

2019-2023, Industry, Knowledge Representation & Reasoning

POD-QUERY

Schema Mapping and Query Rewriting system for personalized decentralized data storage pods

2019-2023, Health, Knowledge Representation & Reasoning

PostTrainCalibration

Code for calibration of trained segmentation models using platt scaling, fine tuning and simple convolutional auxiliary networks 

2019-2023, Health, Explainable & Trustworthy AI, Computer Vision

PowerShap

Library for feature selection 

2019-2023, Industry, Explainable & Trustworthy AI, Predictive Modelling & Forecasting

PRETTIER-MRI

Code to perform super-resolution on structural MRI using fine-tuned convolutional neural networks.

2024-2028, Health, Computer Vision

ProbLog

Probabilistic Logic Programming

2019-2023, Society, Knowledge Representation & Reasoning, Predictive Modelling & Forecasting

pystad

A Library for data analysis using STAD (Simplified Topological Abstraction of Data) networks.

2019-2023, Health, Predictive Modelling & Forecasting

RejectionClass

Algorithm for classification of kidney transplant pathology

Health, 2019-2023, Predictive Modelling & Forecasting, Explainable & Trustworthy AI

R-GAP

Recursive Gradient Attack on Privacy

2019-2023, Society, Explainable & Trustworthy AI

RobBERT

RobBERT is the state-of-the-art Dutch BERT language model.

2019-2023, Speech & Language AI, Society

RR-GCN

Library for creating relational graph convolutional Network embeddings 

2024-2028, Society, Knowledge Representation & Reasoning, Predictive Modelling & Forecasting

Severo

Package designed for analysis and exploration of single-cell RNA-seq datasets.

2019-2023, Health, Predictive Modelling & Forecasting

Shape Fragments

Using SHACL constraint language for a novel use of shapes, by which a set of shapes is used to extract a subgraph from an RDF graph, the so-called shape fragment.

2019-2023, Society, Knowledge Representation & Reasoning

Shepherd

Reinforcement learning agents as a web service

2019-2023, Industry, Reinforcement Learning & Sequential Decision Making, Robotics & Autonomous Systems

SK-MOCBA

Multiobjective Ranking and Selection Using Stochastic Kriging

2019-2023, Industry, Optimization & Experimental Design

Solid-RAG toolbox

Real-world extreme edge prototype to train an LLM (Large Language Model) on personal data in an extreme edge network at people’s home.

2024-2028, Society, Speech & Language AI, Explainable & Trustworthy AI

SparseChem

Fast and accurate machine learning model for small molecules

2019-2023, Health, Predictive Modelling & Forecasting

STADI

Visualisation technique to display topological information in high-dimensional data

Health, 2019-2023, Predictive Modelling & Forecasting

Stream

Tool for hardware-mapping design space exploration of deep learning accelerators

2024-2028, Industry, Optimization & Experimental Design

TAFO-KG

Toolbox for automated failure diagnosis using ontology-based knowledge graphs for heterogenous industrial machines

2024-2028, Planet & Energy, Knowledge Representation & Reasoning, Anomaly Detection & Monitoring

TBH-VAE

Code for deep image hashing based on twin-bottleneck architecture with variational autoencoders.

2019-2023, Society, Computer Vision, Predictive Modelling & Forecasting

Tensorlab+

A reproducible research repository for tensor computations

2019-2023, Industry, Predictive Modelling & Forecasting, Optimization & Experimental Design

TIRE

An autoencoder-based change point detection algorithm for time series data that uses a TIme-Invariant Representation (TIRE).

2019-2023, Industry, Anomaly Detection & Monitoring, Predictive Modelling & Forecasting

TreeNet

Library to unify temporal series with hierarchical semantic information through dynamic path aggregation on tree-structured data

2024-2028, Health, Knowledge Representation & Reasoning, Predictive Modelling & Forecasting

Trieste

Library for Bayesian optimization and active learning

2019-2023, Industry, Optimization & Experimental Design

TSFuse

Python package for automatically constructing features from multi-view time series data.

2019-2023, Industry, Predictive Modelling & Forecasting

Veritas

Veritas is a versatile verification tool for tree ensembles. You can use Veritas to generate adversarial examples, check robustness, find dominant attributes or simply ask domain specific questions about your model.

2019-2023, Society, Explainable & Trustworthy AI

VisCARS

Library for context-aware visualization recommender systems

2024-2028, Industry, Predictive Modelling & Forecasting, Knowledge Representation & Reasoning

Visual Sudoku

Notebooks for a practical session on training a digit classifier and using it to solve visual Sudok's

2019-2023, Society, Computer Vision, Knowledge Representation & Reasoning, Optimization & Experimental Design

Word Prediction in Computational Historical Linguistics

Jupyter notebook and Python library to demonstrate the use of word prediction using deep learning as an aid in historical linguistics.

2019-2023, Society, Speech & Language AI

ZigZag

Hardware architecture (HW)-mapping design space exploration (DSE) framework for deep learning (DL) accelerators. 

2019-2023, Industry, Optimization & Experimental Design